Stop SBATCH workers launched by experimentSBATCH

Graceful (force = FALSE, default): creates per-worker stop files; each worker exits cleanly between jobs once it observes its file. Slurm jobs end normally; remaining PENDING rows stay in the queue and can be resumed with another experimentSBATCH call against the same queue_path.

killExperimentSBATCH(es, force = FALSE, scancel_cmd = "scancel")

Arguments

es

An "experimentSBATCH" object.

force

FALSE (graceful) or TRUE (scancel).

scancel_cmd

Path to scancel; defaults to "scancel" on $PATH.

Value

es, invisibly.

Details

Immediate (force = TRUE): runs scancel <ids> to kill the Slurm jobs straight away. Any rows that were RUNNING at the time of cancellation will remain RUNNING in the queue until the next reclaim pass; clean them up with tmuxRefreshQueueStatus(es$queue_path).

See also

experimentSBATCH, awaitExperimentSBATCH